Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942367.1_cds_XP_016485853.1_76742
CDS Infomation

[gene=LOC107806241] [db_xref=GeneID:107806241] [protein=beta-galactosidase 15-like] [protein_id=XP_016485853.1] [location=join(38462..38623,39179..39387,39485..39551,39652..39888,40516..40604,40699..40804,40933..41020,41139..41257,41360..41521,41864..42045,42149..42252,42360..42469,42572..42802,43084..43298,43391..43775)] [gbkey=CDS]
Sequence

ATGGCTTCTTTCAAGAGTTGTGTTTTCTTTCTCTTTTTGTTGTTCGTTATTAGTTCCATT
CATGCTTATCAAGTTTCTCACGACGGACGAGCTATCACCATTAATGGTGAAAGAAGAGTT
CTTTTATCTGGCTCCATTCATTACCCTAGGAGCACTGCTCAAATGTGGCCAGATTTGATA
AAGAAAGCAAAACAAGGTGGATTAGATGCGATTGAAACCTATGTATTTTGGAATGCACAC
GAGCCACTTCGTCGCCAATATGATTTTTCTGGAAATCTAGATCTCATAAGATTTTTGAAA
ACAATTCAAGATGAAGGACTTTATGCCGTTCTTCGTATTGGACCTTATGTTTGTGCTGAA
TGGAATTATGGAGGATTTCCAGTATGGTTACACAATATGCCTGGAGTTGAGCTCCGCACA
GCCAACCAAGTTTATATGAATGAGATGCAAAATTTTACTCAGTTAATAGTTGATATGGTG
AAACAAGAGAAGCTATTTGCATCTCAAGGAGGTCCAATTATTTTAGCACAAATTGAGAAT
GAATATGGAAACGTACAAACATCTTATGGAGATGCTGGAAAAGCTTATGTTGATTGGTGT
GCTAATTTTGCTCAATCACTTGATATTGGTGTTCCTTGGATCATGTGCCAACAACCTGAT
GTTCCCCAATCCATGATAAATACATGCAATGGTTGGTACTGCGATGATTTTACACCAAGC
AATCCGAATACCCCAAAGATGTGGACTGAAAATTGGACTGGATGGTTCAAGAATTGGGGT
GGCAAAGATCCTTTAAGAACAGCTGAGGATGTTGCTTATGCTGTTGCACGATTTTTCCAA
ACTGGTGGCACATTCCAAAACTATTATATGTACCATGGTGGGACAAATTTTGGGAGAACA
TCTGGTGGTCCATATATTACTACTACATATGATTACGATGCACCACTTGACGAGTTTGGA
AATTTGGCACAGCCAAAATATGGTCATCTGAAGGAACTTCATGATGTGTTACATTCAATG
GAGAAAACTCTTACCAGTGGAAATATTACCAACTCTGATCTTGGAAATTCTGTTGCGGTC
ACTATTTATGCTTTGGACGGACAATCAAGTTGCTTCTTTAGCAATGCAAATGAGACCACA
GATGCAACCATCAATTATAAAGGTGTTCAATACAATGTCCCAGCTTGGTCCGTTAGTATT
CTACCAGATTGCAAGACTGAAGTTTACAACACAGCCAAGGTCAATACACAAACTTCTGTA
ATGGTGAAGAAATCAAATGAGCCAGCTTCTCTCCAATGGTCATGGAGGCCTGAGAAGGTA
GATGAAGCTGTGGTTCTTGGAAGAGGACGATCTTCTGCTCATGAATTGGTTGATCAAAAA
GTTGCTAATGATGTTAGTGACTACATGTGGTACATGACTAATGTCTATATTGGCAAGAAT
GATCCAATCTGGAGTGATAATATGACCCTTCGAGTTAATGGCAGTGGCCACATTCTTCAT
GCTTATGTCAATGGCCAATATCTTGGTTCTCAATGGGCAACATATGGAATATTCAACTAT
GTTTTTGAGAAGCAAGTTAAATTGAATCCAGGCAGGAATCATATATCATTGCTTAGTGCT
ACTATTGGATTACAGAATTATGGAGCTCACTTTGATACAGTACAAAGTGGAATTCCTGGT
CCAGTTGAAATAATTGGAAAGAATGGCGATGAGAGTGTGATTAAGGATTTGTCTTCACAC
AAATGGTCTTATAAGGTAGATTTGAATGGTATTAACAATAAGCTGTTTTCTGGAAACCCT
AAGTTTGAGAATGGACAATGGTTCTCTCAAGAAGTTCAAATCAATAGAATGATGACATGG
TACAAGACAACATTCAAAGCTCCACTAGGAAATGATCCAGTTGTTGTAGACTTTCAAGGT
TTGGGCAAGGGACATGCATGGATTAATGGTGAAAGTATAGGTCGTTATTGGCCAAGTTAT
TTAGCAGAAGAGGAAGGTTGCTCTACTGATTTATGTGATTATCGTGGTAAATATGGTCCT
GACAAATGTGCTTCTGGTTGTGGTGAACCTACTCAAAGATGGTACCATGTTCCTCGTTCG
TTCTTGAAAAGCGACGAAAATACATTGGTTTTGTTTGAAGAATTTGGTGGAAATCCATCA
CTTGTAAATTTCCAAACAGTTCAAGTTGGAACAGCTTGTGGAAGTGCATATGAGAATAAA
ACTATGGAATTATCATGTAATGGTAAAGCTATTACTGCAATTCGTTATGCTAATTTTGGT
GAAACAGAAGGAATTTGTGGCTCTTTTGACAAAGGTAGCTGTTCAAGTGAGGATAATGCT
GTTTCTATTATTGAAAAAGAATGTGTTGGAAAAGAGAAATGTTCAGTGCTAGCATCTGAA
GGAGTGTTTGGATCGACAAATTGTGGAAATAATGCCAAGAGACTTATTGTTGAGGCTGTA
TGTTAG

Peptide Sequence

PEP ID

XP_016485853.1
PEP Infomation

PREDICTED: beta-galactosidase 15-like [Nicotiana tabacum]
Sequence

MASFKSCVFFLFLLFVISSIHAYQVSHDGRAITINGERRVLLSGSIHYPRSTAQMWPDLI
KKAKQGGLDAIETYVFWNAHEPLRRQYDFSGNLDLIRFLKTIQDEGLYAVLRIGPYVCAE
WNYGGFPVWLHNMPGVELRTANQVYMNEMQNFTQLIVDMVKQEKLFASQGGPIILAQIEN
EYGNVQTSYGDAGKAYVDWCANFAQSLDIGVPWIMCQQPDVPQSMINTCNGWYCDDFTPS
NPNTPKMWTENWTGWFKNWGGKDPLRTAEDVAYAVARFFQTGGTFQNYYMYHGGTNFGRT
SGGPYITTTYDYDAPLDEFGNLAQPKYGHLKELHDVLHSMEKTLTSGNITNSDLGNSVAV
TIYALDGQSSCFFSNANETTDATINYKGVQYNVPAWSVSILPDCKTEVYNTAKVNTQTSV
MVKKSNEPASLQWSWRPEKVDEAVVLGRGRSSAHELVDQKVANDVSDYMWYMTNVYIGKN
DPIWSDNMTLRVNGSGHILHAYVNGQYLGSQWATYGIFNYVFEKQVKLNPGRNHISLLSA
TIGLQNYGAHFDTVQSGIPGPVEIIGKNGDESVIKDLSSHKWSYKVDLNGINNKLFSGNP
KFENGQWFSQEVQINRMMTWYKTTFKAPLGNDPVVVDFQGLGKGHAWINGESIGRYWPSY
LAEEEGCSTDLCDYRGKYGPDKCASGCGEPTQRWYHVPRSFLKSDENTLVLFEEFGGNPS
LVNFQTVQVGTACGSAYENKTMELSCNGKAITAIRYANFGETEGICGSFDKGSCSSEDNA
VSIIEKECVGKEKCSVLASEGVFGSTNCGNNAKRLIVEAVC

Transcript Sequence

Gene sequence data has not been registered.